PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082738.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 440aa    MW: 47867.6 Da    PI: 6.6191
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP112.17.9e-3537151289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec....eaesssssasn 84 
                     +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++        s+++a  +    e +++++++++
  XP_011082738.1  37 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAQLppwhptscSAPNA--SfeqeEMQKKVEEEQQ 129
                     79**************************************************************6655554322222..1222211111111111 PP

             TCP  85 sssg....................k 89 
                        +                    +
  XP_011082738.1 130 ---QqlgihhadlvisnisgpsskR 151
                     ...1233445555555555554331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.1E-3037140IPR005333Transcription factor, TCP
PROSITE profilePS5136933.2733997IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MGESSHHNSA SSSRLGLRNS IGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLA  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDELAQL PPWHPTSCSA PNASFEQEEM  120
QKKVEEEQQQ QLGIHHADLV ISNISGPSSK RAMTMLGGED EQQRLQQSGN VNIPNAQNSS  180
FLPPSLDSDA IADTIKSFFP MGASAEVSSS AMQFQNFPTP DLLSRNSGNS QDLRLSLQSF  240
QDPILLHHQP QQHQNPTQQT EQSHSQAQVL LSGTPLGFDG AAGWPEHHQQ AAELSRFQRL  300
APWNSGGETA SESGGAAAGY LFNSPPAPQP LLQQLLGHNQ FFSQRGPLQS SNTPSIRAWM  360
DPSSIAIATA DHSQQQQQQQ QHHHHPTVVP IYPSSMPGIG FASGVGGFSG FHVPARIQGD  420
EEEHDGYSDK PSSASSDSRH
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00009PBMTransfer from 929286Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082738.10.0PREDICTED: transcription factor TCP4-like
RefseqXP_011082737.10.0PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR51e-105TCP4_ARATH; Transcription factor TCP4
TrEMBLA0A0M4MCU80.0A0A0M4MCU8_9LAMI; TCP transcription factor CIN2A
STRINGPGSC0003DMT4000322681e-157(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.31e-83TCP family protein